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Brain Segments Calculation

The stereotactic normalization result is shown on the NORMALIZED page.

The normalized MR image is shown together with the MR template image for verification purposes.

Optionally, if enabled, the White matter parcellation box allows performing the intersection of the white matter region with the selected atlas. Please note that the white matter voxels which do not have any definition in the atlas will be classified as general white matter. 

If the normalization succeeded, start mapping of the brain structures to the MR space by the Segment Brain action button.