Contents
PMOD Base Functionality Introduction
PMOD Basics
PMOD DICOM Functionality
PMOD Database Functionality
PMOD Server Administration
Data Loading and Saving
Image Display and Basic Processing
Volume-of-Interest (VOI) Analysis
VOI Interface
Using Contour VOIs
Using VOI Atlas Files
Structure of VOI Atlases in PMOD
Tree Organization of Atlas VOIs
Probabilistic VOI Atlas
Atlas-based VOI Statistics
Converting Atlas VOIs to Contour VOIs using Outline
Converting Atlas VOIs to Contour VOIs using Normalize
VOI Atlases included in PMOD
Single-Subject AAL Human Brain Atlas
Sprague-Dawley Rat Brain Atlas (Schiffer)
Sprague-Dawley Rat Brain Atlas (A.Schwarz) & PET/SPECT Templates (Groningen)
Wistar Rat Brain Atlas (Tohoku)
Mouse Brain Atlas (Ma-Benveniste-Mirrione)
Domestic Pig / Minipig Brain Atlas (CH.Malbert)
Cynomolgus Monkey Atlas
Preparation of VOI Atlas Files for PMOD
Using Mask Files
Using Label Maps Files
Applying VOI Definitions
Statistics Aggregation
R Statistics in PMOD
Partial-Volume Correction (PVC)
Pipeline Processing
PMOD Image Viewing and VOI Tool (PVIEW)
PMOD Installation and Maintenance
PMOD Copyright Notice
Index